LINC01358

Across TCGA patient cohorts, LINC01358 RNA expression is significantly associated with the RNA expression of many other genes, with 12,127 significant associations in total. UVM shows the largest number of these associations.

The most reproducible LINC01358-associated genes across cancer lineages are GBP1, SLC2A5, and APOL3. Each is linked with LINC01358 in more than 26 cancer types. Because this analysis shows association rather than direction, both LINC01358-to-partner and partner-to-LINC01358 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01358 versus GBP1 in UVM, with a Pearson correlation of 0.59.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01358→partner) and Y-score (partner→LINC01358) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UVM	GBP1 →	+3.088	+0.080	<.001	<.001	2	27
SKCM	SLC2A5 →	+1.144	+0.307	<.001	<.001	3	23
UVM	APOL3 →	+2.298	+0.091	<.001	.002	2	24
SKCM	GIMAP4 →	+1.831	+0.398	<.001	<.001	3	23
SKCM	GBP5 →	+2.464	+0.378	<.001	<.001	3	23
SKCM	PDCD1LG2 →	+1.618	+0.364	<.001	<.001	3	23

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,127 associations by consensus.

LINC01358 vs GBP1 — UVM

Explore this scatter interactively →