Across TCGA patient cohorts, LINC01257 mutation is significantly associated with the RNA expression of many other genes, with 34 significant associations in total. CESC shows the largest number of these associations.

The most reproducible LINC01257-associated genes across cancer lineages are RNA5SP417, COX6CP17, and XACT. Each is linked with LINC01257 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC01257-to-partner and partner-to-LINC01257 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01257→partner) and Y-score (partner→LINC01257) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	RNA5SP417 →	+0.728	+3.936	.004	.005	3	2
CESC	COX6CP17 →	+0.306	+5.812	<.001	.003	3	1
CESC	XACT →	+0.429	+5.103	<.001	.008	3	1
CESC	RNU6-667P →	+0.480	+5.418	<.001	.005	3	1
CESC	BRD9P1 →	+0.110	+5.969	<.001	.002	3	1
CESC	PRXL2AP1 →	+0.093	+5.669	<.001	.003	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 34 associations by consensus.

Exploration

LINC01257 survival (RNA) · tumor vs normal (RNA) · all LINC01257 data types