LINC01250

Across TCGA patient cohorts, LINC01250 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,366 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC01250-associated proteins across cancer lineages are FHOD1, PRKRA, and ANXA2. Each is linked with LINC01250 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC01250-to-partner and partner-to-LINC01250 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01250 versus FHOD1 in GBM, with a Pearson correlation of -0.52.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01250→partner) and Y-score (partner→LINC01250) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	FHOD1 →	-0.375	-0.496	<.001	<.001	3	5
HNSC	PRKRA →	+0.209	+0.294	.005	.005	3	4
GBM	ANXA2 →	-0.659	-0.444	<.001	<.001	3	4
GBM	MTX3_S249 →	+0.598	+0.491	<.001	<.001	3	3
LSCC	NAXE →	+0.364	+0.638	<.001	<.001	3	3
GBM	STK10_S392 →	-0.756	-0.713	.001	.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,366 associations by consensus.

LINC01250 vs FHOD1 — GBM

Explore this scatter interactively →