LINC01238

Across TCGA patient cohorts, LINC01238 RNA expression is significantly associated with the protein abundance of many other proteins, with 15,826 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC01238-associated proteins across cancer lineages are THYN1, MYEF2, and MYEF2_S17. Each is linked with LINC01238 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC01238-to-partner and partner-to-LINC01238 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01238 versus THYN1 in HNSC, with a Pearson correlation of 0.34.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01238→partner) and Y-score (partner→LINC01238) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	THYN1 →	+0.361	+0.655	<.001	<.001	3	5
LSCC	MYEF2 →	+0.860	+0.761	<.001	<.001	3	5
HNSC	MYEF2_S17 →	+0.728	+0.518	<.001	<.001	3	5
HNSC	SLC2A1 →	-0.873	-0.833	<.001	<.001	3	5
GBM	SP4 →	+0.420	+0.763	<.001	<.001	3	4
HNSC	SP4_S46 →	+0.562	+0.597	.003	.007	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 15,826 associations by consensus.

LINC01238 vs THYN1 — HNSC

Explore this scatter interactively →