LINC01222

Across TCGA patient cohorts, LINC01222 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,200 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01222-associated GO terms across cancer lineages are Nucleoside phosphate biosynthetic process, Regulation of attachment of spindle microtubules to kinetochore, and Regulation of immunoglobulin production. Each is linked with LINC01222 in more than 8 cancer types. Because this analysis shows association rather than direction, both LINC01222-to-partner and partner-to-LINC01222 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Nucleoside phosphate biosynthetic process grouped by LINC01222-low versus LINC01222-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01222→partner) and Y-score (partner→LINC01222) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Nucleoside phosphate biosynthetic process →	+0.084	+0.084	<.001	<.001	3	9
STAD	Regulation of attachment of spindle microtubules to kinetochore →	+0.101	+0.065	<.001	.001	3	7
STAD	Regulation of immunoglobulin production →	+0.065	+0.039	<.001	<.001	3	7
COAD	Methylation →	+0.116	+0.007	<.001	.009	3	7
STAD	Regulation of double-strand break repair via homologous recombination →	+0.081	+0.075	<.001	<.001	3	7
STAD	Regulation of defense response to virus →	+0.070	+0.035	<.001	.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,200 associations by consensus.

Nucleoside phosphate biosynthetic process by LINC01222 expression — STAD

Explore this box plot interactively →