LINC01189

Across TCGA patient cohorts, LINC01189 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,451 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01189-associated GO terms across cancer lineages are Protein-RNA complex organization, Regulation of DNA recombination, and mRNA 3'-end processing. Each is linked with LINC01189 in more than 10 cancer types. Because this analysis shows association rather than direction, both LINC01189-to-partner and partner-to-LINC01189 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Protein-RNA complex organization grouped by LINC01189-low versus LINC01189-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01189→partner) and Y-score (partner→LINC01189) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Protein-RNA complex organization →	+0.065	+0.020	<.001	<.001	3	11
STAD	Regulation of DNA recombination →	+0.057	+0.018	<.001	<.001	3	10
ESCA	mRNA 3'-end processing →	+0.082	+0.033	<.001	<.001	3	10
ESCA	Positive regulation of DNA recombination →	+0.061	+0.028	<.001	.005	3	10
ESCA	Response to ionizing radiation →	+0.085	+0.033	<.001	<.001	3	9
STAD	Regulation of double-strand break repair via homologous recombination →	+0.059	+0.023	<.001	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,451 associations by consensus.

Protein-RNA complex organization by LINC01189 expression — STAD

Explore this box plot interactively →