LINC01149

Across TCGA patient cohorts, LINC01149 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,516 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01149-associated GO terms across cancer lineages are Positive regulation of DNA metabolic process, Protein polyubiquitination, and Protein-containing complex disassembly. Each is linked with LINC01149 in more than 23 cancer types. Because this analysis shows association rather than direction, both LINC01149-to-partner and partner-to-LINC01149 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Positive regulation of DNA metabolic process grouped by LINC01149-low versus LINC01149-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01149→partner) and Y-score (partner→LINC01149) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Positive regulation of DNA metabolic process →	+0.047	+0.055	<.001	<.001	3	24
STAD	Protein polyubiquitination →	+0.052	+0.053	<.001	<.001	3	22
STAD	Protein-containing complex disassembly →	+0.051	+0.055	<.001	<.001	3	22
STAD	Regulation of DNA repair →	+0.046	+0.052	<.001	<.001	3	22
ESCA	Positive regulation of plasma membrane bounded cell projection assembly →	+0.056	+0.053	<.001	<.001	2	21
STAD	Obsolete histone modification →	+0.048	+0.055	<.001	<.001	3	20

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,516 associations by consensus.

Positive regulation of DNA metabolic process by LINC01149 expression — STAD

Explore this box plot interactively →