LINC01143

Across TCGA patient cohorts, LINC01143 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,136 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible LINC01143-associated proteins across cancer lineages are ZMYM3, ZNF638, and DNMT3A. Each is linked with LINC01143 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC01143-to-partner and partner-to-LINC01143 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01143 versus ZMYM3 in LSCC, with a Pearson correlation of 0.51.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01143→partner) and Y-score (partner→LINC01143) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	ZMYM3 →	+0.378	+0.920	<.001	<.001	3	5
GBM	ZNF638 →	+0.263	+0.596	.001	.005	3	5
OV	DNMT3A →	+0.692	+0.874	<.001	<.001	3	5
GBM	KDM1A →	+0.366	+0.648	<.001	.002	3	5
LUAD	LRWD1_S243 →	+1.254	+0.594	<.001	<.001	3	5
OV	USP39 →	+0.315	+1.220	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,136 associations by consensus.

LINC01143 vs ZMYM3 — LSCC

Explore this scatter interactively →