Across TCGA patient cohorts, LINC01139 mutation is significantly associated with the RNA expression of many other genes, with 28 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC01139-associated genes across cancer lineages are MIR6839, RN7SL769P, and LINC01670. Each is linked with LINC01139 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC01139-to-partner and partner-to-LINC01139 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01139→partner) and Y-score (partner→LINC01139) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	MIR6839 →	+0.523	+3.884	<.001	.003	3	1
UCEC	RN7SL769P →	+0.384	+3.169	.005	.006	3	1
UCEC	LINC01670 →	+0.081	+3.580	.003	.002	3	1
UCEC	MIR4748 →	+0.814	+3.216	.003	.005	3	1
UCEC	RNY4P27 →	+0.288	+4.132	<.001	.009	3	1
UCEC	RNU5E-8P →	+0.353	+3.771	.006	.003	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 28 associations by consensus.

Exploration

LINC01139 survival (RNA) · tumor vs normal (RNA) · all LINC01139 data types