LINC01109

Across TCGA patient cohorts, LINC01109 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,198 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01109-associated GO terms across cancer lineages are Neuron projection extension, Positive regulation of proteasomal ubiquitin-dependent protein catabolic process, and Regulation of sister chromatid segregation. Each is linked with LINC01109 in more than 9 cancer types. Because this analysis shows association rather than direction, both LINC01109-to-partner and partner-to-LINC01109 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Neuron projection extension grouped by LINC01109-low versus LINC01109-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01109→partner) and Y-score (partner→LINC01109) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Neuron projection extension →	+0.058	+0.024	<.001	.001	3	10
STAD	Positive regulation of proteasomal ubiquitin-dependent protein catabolic process →	+0.091	+0.047	<.001	.001	3	9
STAD	Regulation of sister chromatid segregation →	+0.093	+0.030	<.001	.004	3	9
ESCA	Postsynapse organization →	+0.048	+0.010	<.001	.004	3	9
STAD	Regulation of cyclin-dependent protein kinase activity →	+0.070	+0.033	<.001	.002	3	9
STAD	Positive regulation of DNA metabolic process →	+0.090	+0.024	<.001	.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,198 associations by consensus.

Neuron projection extension by LINC01109 expression — STAD

Explore this box plot interactively →