LINC01050

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC01050 RNA expression is significantly associated with the protein abundance of many other proteins, with 16,051 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LINC01050-associated proteins across cancer lineages are P4HA2, PLOD1, and COLGALT1. Each is linked with LINC01050 in more than 8 cancer types. Because this analysis shows association rather than direction, both LINC01050-to-partner and partner-to-LINC01050 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01050 versus P4HA2 in GBM, with a Pearson correlation of 0.54.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01050→partner) and Y-score (partner→LINC01050) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMP4HA2 →+0.847+0.400<.001<.00139
BRCAPLOD1 →+0.714+0.705<.001<.00139
GBMCOLGALT1 →+0.646+0.659<.001<.00139
COADFAP →+0.866+0.704<.001<.00139
GBMITGA5 →+0.518+0.571<.001<.00139
OVMXRA5 →+1.102+0.346<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 16,051 associations by consensus.

LINC01050 vs P4HA2 — GBM

Per-sample scatter of LINC01050 vs P4HA2 in GBM (Pearson r = 0.54).

Explore this scatter interactively →

Exploration