LINC01039

Across TCGA patient cohorts, LINC01039 RNA expression is significantly associated with the RNA expression of many other genes, with 5,254 significant associations in total. COAD shows the largest number of these associations.

The most reproducible LINC01039-associated genes across cancer lineages are RNU6-597P, LINC01327, and RN7SL685P. Each is linked with LINC01039 in more than 12 cancer types. Because this analysis shows association rather than direction, both LINC01039-to-partner and partner-to-LINC01039 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01039 versus RNU6-597P in COAD, with a Pearson correlation of 0.68.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01039→partner) and Y-score (partner→LINC01039) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	RNU6-597P →	+0.568	+0.301	<.001	<.001	3	13
DLBC	LINC01327 →	+0.698	+0.157	<.001	<.001	3	12
DLBC	RN7SL685P →	+0.575	+0.268	<.001	<.001	3	12
COAD	RN7SL515P →	+0.885	+0.080	<.001	<.001	3	12
COAD	RPEP1 →	+0.512	+0.160	<.001	<.001	3	12
COAD	RBM22P4 →	+0.528	+0.103	<.001	<.001	3	12

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,254 associations by consensus.

LINC01039 vs RNU6-597P — COAD

Explore this scatter interactively →