LINC01028

Across TCGA patient cohorts, LINC01028 RNA expression is significantly associated with the RNA expression of many other genes, with 6,730 significant associations in total. KIRP shows the largest number of these associations.

The most reproducible LINC01028-associated genes across cancer lineages are LINC01497, COL4A3, and FAM180B. Each is linked with LINC01028 in more than 13 cancer types. Because this analysis shows association rather than direction, both LINC01028-to-partner and partner-to-LINC01028 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01028 versus LINC01497 in ACC, with a Pearson correlation of 0.57.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01028→partner) and Y-score (partner→LINC01028) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ACC	LINC01497 →	+1.052	+0.031	<.001	<.001	3	14
ACC	COL4A3 →	+1.468	+0.027	<.001	.001	3	12
SARC	FAM180B →	+1.645	+0.540	<.001	<.001	3	12
STAD	VN1R7P →	+0.514	+0.152	<.001	<.001	3	11
MESO	PRG4 →	+3.069	+0.484	<.001	.001	3	11
SARC	LMO7DN →	+0.744	+0.504	<.001	<.001	3	11

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,730 associations by consensus.

LINC01028 vs LINC01497 — ACC

Explore this scatter interactively →