LINC01028

Across TCGA patient cohorts, LINC01028 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,979 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01028-associated GO terms across cancer lineages are Regulation of protein serine/threonine kinase activity, Cellular respiration, and Ribose phosphate biosynthetic process. Each is linked with LINC01028 in more than 12 cancer types. Because this analysis shows association rather than direction, both LINC01028-to-partner and partner-to-LINC01028 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of protein serine/threonine kinase activity grouped by LINC01028-low versus LINC01028-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01028→partner) and Y-score (partner→LINC01028) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of protein serine/threonine kinase activity →	+0.054	+0.142	<.001	<.001	3	13
STAD	Cellular respiration →	+0.078	+0.164	<.001	<.001	3	13
STAD	Ribose phosphate biosynthetic process →	+0.068	+0.141	<.001	<.001	3	13
STAD	Positive regulation of canonical Wnt signaling pathway →	+0.061	+0.144	<.001	<.001	3	12
STAD	Regulation of epithelial cell apoptotic process →	+0.047	+0.133	<.001	<.001	3	12
ESCA	Negative regulation of NF-kappaB transcription factor activity →	+0.059	+0.273	<.001	<.001	3	12

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,979 associations by consensus.

Regulation of protein serine/threonine kinase activity by LINC01028 expression — STAD

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