LINC01011

Across TCGA patient cohorts, LINC01011 mutation is significantly associated with the RNA expression of many other genes, with 48 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC01011-associated genes across cancer lineages are MIR3129, RN7SL140P, and RNA5SP414. Each is linked with LINC01011 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC01011-to-partner and partner-to-LINC01011 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR3129 grouped by LINC01011-low versus LINC01011-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01011→partner) and Y-score (partner→LINC01011) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	MIR3129 →	+0.752	+4.430	<.001	.002	3	1
UCEC	RN7SL140P →	+0.195	+4.997	<.001	.003	3	1
UCEC	RNA5SP414 →	+1.463	+3.840	<.001	.007	3	1
UCEC	RNA5SP412 →	+2.083	+4.967	<.001	<.001	3	1
UCEC	C9orf62 →	+0.233	+4.474	<.001	.002	3	1
UCEC	OR6K6 →	+0.170	+4.943	<.001	<.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 48 associations by consensus.

MIR3129 by LINC01011 expression — UCEC

Explore this box plot interactively →