LINC01007

Across TCGA patient cohorts, LINC01007 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,021 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01007-associated GO terms across cancer lineages are Negative regulation of growth, Skeletal system morphogenesis, and Bone morphogenesis. Each is linked with LINC01007 in more than 13 cancer types. Because this analysis shows association rather than direction, both LINC01007-to-partner and partner-to-LINC01007 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Negative regulation of growth grouped by LINC01007-low versus LINC01007-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01007→partner) and Y-score (partner→LINC01007) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Negative regulation of growth →	+0.037	+0.039	<.001	<.001	3	14
STAD	Skeletal system morphogenesis →	+0.035	+0.034	<.001	<.001	3	11
TGCT	Bone morphogenesis →	+0.072	+0.060	<.001	<.001	3	10
TGCT	Developmental growth involved in morphogenesis →	+0.042	+0.058	<.001	<.001	3	10
STAD	Fat cell differentiation →	+0.038	+0.037	<.001	<.001	3	10
STAD	Regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator →	+0.046	+0.037	<.001	<.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,021 associations by consensus.

Negative regulation of growth by LINC01007 expression — STAD

Explore this box plot interactively →