LINC00997

Across TCGA patient cohorts, LINC00997 RNA expression is significantly associated with the protein abundance of many other proteins, with 14,643 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LINC00997-associated proteins across cancer lineages are FOXK1, STAG2, and DHX9. Each is linked with LINC00997 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC00997-to-partner and partner-to-LINC00997 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00997 versus FOXK1 in LSCC, with a Pearson correlation of 0.57.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00997→partner) and Y-score (partner→LINC00997) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	FOXK1 →	+0.267	+0.346	<.001	<.001	3	5
GBM	STAG2 →	+0.357	+0.598	<.001	<.001	3	5
GBM	DHX9 →	+0.206	+0.409	<.001	<.001	3	5
LSCC	SF3B3 →	+0.257	+0.524	<.001	<.001	3	5
GBM	CELF1 →	+0.238	+0.508	<.001	<.001	3	5
PDAC	PPIH →	+0.209	+0.361	.005	.003	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 14,643 associations by consensus.

LINC00997 vs FOXK1 — LSCC

Explore this scatter interactively →