LINC00993

Across TCGA patient cohorts, LINC00993 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,762 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible LINC00993-associated proteins across cancer lineages are AKAP12_T21, PRKG1, and COL16A1. Each is linked with LINC00993 in more than 3 cancer types. Because this analysis shows association rather than direction, both LINC00993-to-partner and partner-to-LINC00993 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00993 versus AKAP12_T21 in BRCA, with a Pearson correlation of 0.47.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00993→partner) and Y-score (partner→LINC00993) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	AKAP12_T21 →	+0.918	+4.384	.001	<.001	3	4
BRCA	PRKG1 →	+0.519	+4.320	<.001	<.001	3	3
CCRCC	COL16A1 →	+1.068	+0.063	<.001	.006	3	3
BRCA	AKAP12_S627 →	+0.863	+4.684	<.001	<.001	3	3
BRCA	HSPG2_S888 →	+0.811	+2.930	.006	.003	3	3
OV	COPZ2 →	+0.680	+0.094	.002	.009	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,762 associations by consensus.

LINC00993 vs AKAP12_T21 — BRCA

Explore this scatter interactively →