LINC00989

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC00989 RNA expression is significantly associated with the protein abundance of many other proteins, with 15,285 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible LINC00989-associated proteins across cancer lineages are SEPTIN4, BGN, and LUM. Each is linked with LINC00989 in more than 7 cancer types. Because this analysis shows association rather than direction, both LINC00989-to-partner and partner-to-LINC00989 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00989 versus SEPTIN4 in OV, with a Pearson correlation of 0.38.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00989→partner) and Y-score (partner→LINC00989) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVSEPTIN4 →+0.510+0.086<.001<.00138
GBMBGN →+0.768+0.169<.001.00238
OVLUM →+0.755+0.077<.001<.00138
BRCAMSRB3 →+0.822+0.210<.001<.00137
CCRCCRPS2 →-0.353-0.880<.001<.00137
CCRCCCOL15A1 →+0.486+0.781<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,285 associations by consensus.

LINC00989 vs SEPTIN4 — OV

Per-sample scatter of LINC00989 vs SEPTIN4 in OV (Pearson r = 0.38).

Explore this scatter interactively →

Exploration