LINC00960

Across TCGA patient cohorts, LINC00960 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,143 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC00960-associated proteins across cancer lineages are MKNK1, VEZF1, and ZSCAN31_S181. Each is linked with LINC00960 in more than 2 cancer types. Because this analysis shows association rather than direction, both LINC00960-to-partner and partner-to-LINC00960 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00960 versus MKNK1 in GBM, with a Pearson correlation of -0.39.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00960→partner) and Y-score (partner→LINC00960) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	MKNK1 →	-0.306	-0.588	<.001	<.001	3	3
GBM	VEZF1 →	+0.401	+0.682	<.001	<.001	3	2
LSCC	ZSCAN31_S181 →	+0.568	+0.501	<.001	.005	3	2
GBM	NELFE →	+0.308	+0.711	<.001	<.001	3	2
GBM	PDIA4_S470 →	-0.769	-0.537	<.001	<.001	3	2
HNSC	SEC16A_S559 →	+0.943	+0.773	<.001	.004	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,143 associations by consensus.

LINC00960 vs MKNK1 — GBM

Explore this scatter interactively →