LINC00945

Across TCGA patient cohorts, LINC00945 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,715 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC00945-associated proteins across cancer lineages are PDK1, PDZD11, and AMPD3_S85. Each is linked with LINC00945 in more than 2 cancer types. Because this analysis shows association rather than direction, both LINC00945-to-partner and partner-to-LINC00945 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00945 versus PDK1 in GBM, with a Pearson correlation of -0.37.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00945→partner) and Y-score (partner→LINC00945) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	PDK1 →	-0.441	-0.757	<.001	.001	3	3
GBM	PDZD11 →	-0.416	-0.713	<.001	.001	3	3
COAD	AMPD3_S85 →	+0.323	+0.033	.006	.006	3	2
GBM	ZFP64 →	+0.437	+1.040	.002	<.001	3	2
UCEC	ARFGEF2_T244 →	+0.721	+0.309	.001	.009	3	2
LUAD	OCRL →	+0.182	+0.418	<.001	.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,715 associations by consensus.

LINC00945 vs PDK1 — GBM

Explore this scatter interactively →