LINC00933

Across TCGA patient cohorts, LINC00933 mutation is significantly associated with the RNA expression of many other genes, with 48 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible LINC00933-associated genes across cancer lineages are MIR4288, RN7SKP113, and MIR548F1. Each is linked with LINC00933 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC00933-to-partner and partner-to-LINC00933 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR4288 grouped by LINC00933-low versus LINC00933-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00933→partner) and Y-score (partner→LINC00933) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	MIR4288 →	+0.931	+5.484	<.001	.005	3	2
UCEC	RN7SKP113 →	+0.268	+5.621	<.001	.004	3	2
LUAD	MIR548F1 →	+0.730	+7.930	<.001	.008	3	2
UCEC	MIR4499 →	+0.775	+5.081	<.001	.008	3	1
UCEC	MIR6500 →	+0.653	+5.133	.001	.008	3	1
UCEC	PRAMEF13 →	+0.086	+6.453	<.001	.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 48 associations by consensus.

MIR4288 by LINC00933 expression — UCEC

Explore this box plot interactively →