LINC00900

Across TCGA patient cohorts, LINC00900 RNA expression is significantly associated with the RNA expression of many other genes, with 16,990 significant associations in total. UVM shows the largest number of these associations.

The most reproducible LINC00900-associated genes across cancer lineages are RGL1, CADM1, and PTPRN2-AS1. Each is linked with LINC00900 in more than 26 cancer types. Because this analysis shows association rather than direction, both LINC00900-to-partner and partner-to-LINC00900 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00900 versus RGL1 in TGCT, with a Pearson correlation of 0.75.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00900→partner) and Y-score (partner→LINC00900) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
TGCT	RGL1 →	+1.208	+0.613	<.001	<.001	3	27
SARC	CADM1 →	+1.915	+1.135	<.001	<.001	3	27
KIRP	PTPRN2-AS1 →	+0.943	+0.436	<.001	<.001	3	27
LAML	NFAM1 →	+1.511	+0.745	<.001	<.001	3	27
SKCM	LOXL3 →	+1.598	+0.595	<.001	<.001	3	26
KICH	PLXNC1 →	+1.521	+0.366	<.001	.002	3	26

Each partner links to its Q-omics profile. Showing the 6 strongest of 16,990 associations by consensus.

LINC00900 vs RGL1 — TGCT

Explore this scatter interactively →