LINC00888

Across TCGA patient cohorts, LINC00888 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,636 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC00888-associated proteins across cancer lineages are DBN1, PFN2, and SDF2. Each is linked with LINC00888 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC00888-to-partner and partner-to-LINC00888 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00888 versus DBN1 in GBM, with a Pearson correlation of 0.38.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00888→partner) and Y-score (partner→LINC00888) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	DBN1 →	+0.383	+0.641	<.001	<.001	3	5
HNSC	PFN2 →	+0.791	+1.057	<.001	<.001	3	5
LSCC	SDF2 →	+0.578	+0.902	<.001	<.001	3	4
LSCC	MAP1B_S614 →	+1.555	+0.993	<.001	<.001	3	4
LSCC	MAP1B_T1282 →	+1.398	+0.873	<.001	<.001	3	4
BRCA	PLOD2 →	+0.726	+0.831	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,636 associations by consensus.

LINC00888 vs DBN1 — GBM

Explore this scatter interactively →