LINC00886

Across TCGA patient cohorts, LINC00886 mutation is significantly associated with the RNA expression of many other genes, with 1,112 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC00886-associated genes across cancer lineages are MIR938, RNY4P16, and MIR620. Each is linked with LINC00886 in more than 2 cancer types. Because this analysis shows association rather than direction, both LINC00886-to-partner and partner-to-LINC00886 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR938 grouped by LINC00886-low versus LINC00886-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00886→partner) and Y-score (partner→LINC00886) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	MIR938 →	+0.326	+2.302	.008	.003	3	3
LUSC	RNY4P16 →	+0.243	+4.733	<.001	.004	3	2
LUSC	MIR620 →	+0.271	+4.906	<.001	.003	3	2
UCEC	RNA5SP140 →	+1.198	+2.937	<.001	.002	3	2
BRCA	SDR42E1P1 →	+0.053	+8.057	<.001	.005	3	1
SKCM	MIR4487 →	+0.493	+7.816	<.001	.008	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 1,112 associations by consensus.

MIR938 by LINC00886 expression — UCEC

Explore this box plot interactively →