LINC00879

Across TCGA patient cohorts, LINC00879 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,528 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC00879-associated GO terms across cancer lineages are Nucleoside triphosphate metabolic process, Protein localization to chromosome, and Regulation of mRNA processing. Each is linked with LINC00879 in more than 8 cancer types. Because this analysis shows association rather than direction, both LINC00879-to-partner and partner-to-LINC00879 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Nucleoside triphosphate metabolic process grouped by LINC00879-low versus LINC00879-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00879→partner) and Y-score (partner→LINC00879) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Nucleoside triphosphate metabolic process →	+0.091	+0.156	<.001	<.001	3	9
STAD	Protein localization to chromosome →	+0.058	+0.090	<.001	<.001	3	9
STAD	Regulation of mRNA processing →	+0.068	+0.083	<.001	<.001	3	8
ESCA	Biological process involved in interaction with host →	+0.064	+0.187	<.001	.006	3	8
STAD	Establishment of protein localization to membrane →	+0.063	+0.084	<.001	<.001	3	8
STAD	Mitotic spindle assembly →	+0.055	+0.078	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,528 associations by consensus.

Nucleoside triphosphate metabolic process by LINC00879 expression — STAD

Explore this box plot interactively →