LINC00871

Across TCGA patient cohorts, LINC00871 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,087 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible LINC00871-associated proteins across cancer lineages are OPA1, PEX1, and SLC9A3R1_S269. Each is linked with LINC00871 in more than 2 cancer types. Because this analysis shows association rather than direction, both LINC00871-to-partner and partner-to-LINC00871 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00871 versus OPA1 in LSCC, with a Pearson correlation of 0.35.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00871→partner) and Y-score (partner→LINC00871) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	OPA1 →	+0.444	+0.762	<.001	<.001	3	3
HNSC	PEX1 →	+0.405	+0.943	<.001	<.001	3	3
LSCC	SLC9A3R1_S269 →	+0.598	+0.745	.007	<.001	3	3
HNSC	USP25 →	-0.200	-0.611	<.001	.004	3	3
UCEC	ZFHX3_S3432 →	+0.452	+0.811	.005	.001	3	3
UCEC	CD9 →	+0.667	+0.956	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,087 associations by consensus.

LINC00871 vs OPA1 — LSCC

Explore this scatter interactively →