LINC00869

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC00869 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,114 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible LINC00869-associated proteins across cancer lineages are PLEKHA6, BROX, and CAB39L. Each is linked with LINC00869 in more than 5 cancer types. Because this analysis shows association rather than direction, both LINC00869-to-partner and partner-to-LINC00869 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00869 versus PLEKHA6 in LSCC, with a Pearson correlation of 0.46.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00869→partner) and Y-score (partner→LINC00869) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCPLEKHA6 →+0.691+0.571<.001.00135
GBMBROX →+0.321+0.487<.001.00235
COADCAB39L →+0.801+0.324<.001<.00135
HNSCSLC2A1 →-0.886-0.334<.001.00235
HNSCDDAH2 →+0.371+0.417.005.00935
GBMTMOD2 →+0.478+0.392<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,114 associations by consensus.

LINC00869 vs PLEKHA6 — LSCC

Per-sample scatter of LINC00869 vs PLEKHA6 in LSCC (Pearson r = 0.46).

Explore this scatter interactively →

Exploration