LINC00869

Across TCGA patient cohorts, LINC00869 mutation is significantly associated with the RNA expression of many other genes, with 4,410 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC00869-associated genes across cancer lineages are RPS15AP3, OR7A8P, and SELENOTP2. Each is linked with LINC00869 in more than 3 cancer types. Because this analysis shows association rather than direction, both LINC00869-to-partner and partner-to-LINC00869 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RPS15AP3 grouped by LINC00869-low versus LINC00869-high in LUSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00869→partner) and Y-score (partner→LINC00869) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUSC	RPS15AP3 →	+0.223	+5.273	<.001	.006	3	4
CESC	OR7A8P →	+0.093	+3.590	<.001	.002	3	2
CESC	SELENOTP2 →	+0.087	+3.269	<.001	.009	3	2
SKCM	PRPF18 →	+0.661	+3.208	.001	.009	3	2
UCEC	RRM1 →	+1.028	+2.807	<.001	<.001	3	2
UCEC	FEN1 →	+0.749	+2.839	<.001	<.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,410 associations by consensus.

RPS15AP3 by LINC00869 expression — LUSC

Explore this box plot interactively →