Across TCGA patient cohorts, LINC00840 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,800 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC00840-associated proteins across cancer lineages are CSF1R, SNX18, and SYNPO2. Each is linked with LINC00840 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC00840-to-partner and partner-to-LINC00840 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00840→partner) and Y-score (partner→LINC00840) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	CSF1R →	+0.714	+0.256	<.001	<.001	3	5
OV	SNX18 →	+0.819	+0.117	<.001	.003	3	4
BRCA	SYNPO2 →	+0.889	+0.204	<.001	<.001	3	4
GBM	LMOD1 →	+0.761	+0.223	<.001	<.001	3	4
COAD	LPP →	+0.614	+0.114	<.001	.003	3	4
BRCA	LUM →	+1.270	+0.175	<.001	.007	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 8,800 associations by consensus.

Exploration

LINC00840 survival (RNA) · tumor vs normal (RNA) · all LINC00840 data types