LINC00837

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC00837 mutation is significantly associated with the RNA expression of many other genes, with 16 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC00837-associated genes across cancer lineages are OR4P4, MIR1255A, and TCERG1P1. Each is linked with LINC00837 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC00837-to-partner and partner-to-LINC00837 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR4P4 grouped by LINC00837-low versus LINC00837-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00837→partner) and Y-score (partner→LINC00837) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECOR4P4 →+0.340+5.771<.001.00331
UCECMIR1255A →+0.888+5.031<.001.00931
UCECTCERG1P1 →+0.219+5.186.006.00731
UCECFEM1AP1 →+0.069+5.133<.001.00831
UCECMRPL57P6 →+0.456+6.027<.001.00231
UCECRPL7L1P7 →+0.224+5.852<.001.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 16 associations by consensus.

OR4P4 by LINC00837 expression — UCEC

Box plot of OR4P4 in LINC00837-low vs LINC00837-high samples in UCEC.

Explore this box plot interactively →

Exploration