LINC00683

Across TCGA patient cohorts, LINC00683 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,221 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible LINC00683-associated proteins across cancer lineages are TPPP3, TRAF3IP1, and YARS1. Each is linked with LINC00683 in more than 3 cancer types. Because this analysis shows association rather than direction, both LINC00683-to-partner and partner-to-LINC00683 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00683 versus TPPP3 in OV, with a Pearson correlation of 0.55.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00683→partner) and Y-score (partner→LINC00683) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OV	TPPP3 →	+1.349	+0.475	<.001	<.001	3	4
BRCA	TRAF3IP1 →	+0.401	+0.256	<.001	<.001	3	4
CCRCC	YARS1 →	-0.331	-0.463	<.001	<.001	3	4
BRCA	ZNF516 →	+0.501	+0.295	<.001	<.001	3	4
BRCA	GBP1 →	-0.877	-0.348	<.001	<.001	3	4
BRCA	HDGFL3 →	+0.868	+0.345	<.001	.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,221 associations by consensus.

LINC00683 vs TPPP3 — OV

Explore this scatter interactively →