LINC00662

Across TCGA patient cohorts, LINC00662 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,670 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC00662-associated proteins across cancer lineages are SIN3A, DNAJC1, and RBM12B. Each is linked with LINC00662 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC00662-to-partner and partner-to-LINC00662 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00662 versus SIN3A in GBM, with a Pearson correlation of 0.40.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00662→partner) and Y-score (partner→LINC00662) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	SIN3A →	+0.230	+0.383	<.001	.001	3	4
LUAD	DNAJC1 →	-0.386	-0.607	<.001	<.001	3	4
GBM	RBM12B →	+0.293	+0.628	<.001	<.001	3	4
LSCC	PAXBP1 →	+0.269	+0.615	<.001	.003	3	4
GBM	PCIF1 →	+0.223	+0.431	<.001	<.001	3	4
GBM	SAE1 →	+0.358	+0.523	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,670 associations by consensus.

LINC00662 vs SIN3A — GBM

Explore this scatter interactively →