LINC00642

Across TCGA patient cohorts, LINC00642 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,022 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC00642-associated GO terms across cancer lineages are Regulation of calcium ion export across plasma membrane, Cellular respiration, and Regulation of peptide transport. Each is linked with LINC00642 in more than 13 cancer types. Because this analysis shows association rather than direction, both LINC00642-to-partner and partner-to-LINC00642 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of calcium ion export across plasma membrane grouped by LINC00642-low versus LINC00642-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00642→partner) and Y-score (partner→LINC00642) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of calcium ion export across plasma membrane →	+0.036	+0.076	<.001	<.001	3	14
STAD	Cellular respiration →	+0.050	+0.080	<.001	<.001	3	13
STAD	Regulation of peptide transport →	+0.030	+0.069	<.001	<.001	3	12
STAD	Positive regulation of intracellular transport →	+0.051	+0.074	<.001	<.001	3	12
STAD	Transport along microtubule →	+0.041	+0.078	<.001	<.001	3	12
STAD	Regulation of cell morphogenesis →	+0.045	+0.074	<.001	<.001	3	12

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,022 associations by consensus.

Regulation of calcium ion export across plasma membrane by LINC00642 expression — STAD

Explore this box plot interactively →