LINC00641

Across TCGA patient cohorts, LINC00641 RNA expression is significantly associated with the protein abundance of many other proteins, with 21,462 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC00641-associated proteins across cancer lineages are CLIP1_S1236, SNIP1_S76, and SEC63_T537. Each is linked with LINC00641 in more than 5 cancer types. Because this analysis shows association rather than direction, both LINC00641-to-partner and partner-to-LINC00641 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00641 versus CLIP1_S1236 in HNSC, with a Pearson correlation of -0.36.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00641→partner) and Y-score (partner→LINC00641) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	CLIP1_S1236 →	-0.678	-0.700	.002	.001	3	6
OV	SNIP1_S76 →	-1.248	-1.151	<.001	<.001	3	5
PDAC	SEC63_T537 →	-0.969	-0.592	<.001	<.001	3	5
PDAC	HNRNPM_S432 →	-0.498	-0.455	<.001	<.001	3	5
PDAC	STIM1_S257 →	-0.616	-0.368	<.001	<.001	3	5
GBM	TAGLN2_S163 →	-0.692	-0.587	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 21,462 associations by consensus.

LINC00641 vs CLIP1_S1236 — HNSC

Explore this scatter interactively →