LINC00640

Across TCGA patient cohorts, LINC00640 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,198 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LINC00640-associated proteins across cancer lineages are MTA1, FRMD6_S544, and TRMT5. Each is linked with LINC00640 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC00640-to-partner and partner-to-LINC00640 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00640 versus MTA1 in GBM, with a Pearson correlation of 0.29.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00640→partner) and Y-score (partner→LINC00640) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	MTA1 →	+0.421	+0.578	<.001	<.001	3	5
LSCC	FRMD6_S544 →	+0.826	+0.655	<.001	<.001	3	5
LUAD	TRMT5 →	+0.360	+0.254	<.001	<.001	2	5
BRCA	HSPG2 →	+0.371	+0.261	.007	<.001	3	4
LSCC	FRMD6 →	+0.495	+0.627	<.001	<.001	3	4
LSCC	GCC2 →	-0.253	-0.808	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,198 associations by consensus.

LINC00640 vs MTA1 — GBM

Explore this scatter interactively →