LINC00559

Across TCGA patient cohorts, LINC00559 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,106 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC00559-associated GO terms across cancer lineages are Microtubule cytoskeleton organization involved in mitosis, Mitotic metaphase chromosome alignment, and Positive regulation of cell cycle phase transition. Each is linked with LINC00559 in more than 11 cancer types. Because this analysis shows association rather than direction, both LINC00559-to-partner and partner-to-LINC00559 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Microtubule cytoskeleton organization involved in mitosis grouped by LINC00559-low versus LINC00559-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00559→partner) and Y-score (partner→LINC00559) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Microtubule cytoskeleton organization involved in mitosis →	+0.067	+0.043	<.001	<.001	3	12
STAD	Mitotic metaphase chromosome alignment →	+0.078	+0.042	<.001	<.001	3	12
ESCA	Positive regulation of cell cycle phase transition →	+0.074	+0.035	<.001	<.001	2	12
STAD	Chromosome localization →	+0.069	+0.043	<.001	<.001	3	11
STAD	Metaphase chromosome alignment →	+0.075	+0.041	<.001	<.001	3	11
ESCA	Positive regulation of mitotic cell cycle →	+0.072	+0.030	<.001	.004	2	12

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,106 associations by consensus.

Microtubule cytoskeleton organization involved in mitosis by LINC00559 expression — STAD

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