LINC00545

Across TCGA patient cohorts, LINC00545 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,082 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC00545-associated GO terms across cancer lineages are Peptidyl-lysine oxidation, Collagen fibril organization, and Collagen biosynthetic process. Each is linked with LINC00545 in more than 15 cancer types. Because this analysis shows association rather than direction, both LINC00545-to-partner and partner-to-LINC00545 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Peptidyl-lysine oxidation grouped by LINC00545-low versus LINC00545-high in UCS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00545→partner) and Y-score (partner→LINC00545) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCS	Peptidyl-lysine oxidation →	+0.133	+2.052	<.001	<.001	3	16
UCS	Collagen fibril organization →	+0.073	+1.488	<.001	<.001	3	16
UCS	Collagen biosynthetic process →	+0.054	+1.616	<.001	<.001	3	16
STAD	Positive regulation of fibroblast proliferation →	+0.045	+0.119	<.001	<.001	3	16
TGCT	Extracellular matrix assembly →	+0.076	+0.735	<.001	<.001	3	15
UCS	Regulation of epithelial to mesenchymal transition involved in endocardial cushion formation →	+0.113	+1.751	.001	<.001	3	15

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,082 associations by consensus.

Peptidyl-lysine oxidation by LINC00545 expression — UCS

Explore this box plot interactively →