LINC00518

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC00518 mutation is significantly associated with the RNA expression of many other genes, with 72 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC00518-associated genes across cancer lineages are ZNF25-DT, RN7SL442P, and SSXP4. Each is linked with LINC00518 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC00518-to-partner and partner-to-LINC00518 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00518→partner) and Y-score (partner→LINC00518) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADZNF25-DT →+0.079+5.087<.001.00432
UCECRN7SL442P →+0.500+3.903.005.00232
LUADSSXP4 →+0.113+6.924<.001<.00131
LUADRNA5SP432 →+0.551+6.473<.001<.00131
LUADKLK9 →+0.265+4.798<.001.00631
LUADSLC25A20P1 →+0.069+4.984<.001.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 72 associations by consensus.

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