LINC00514

Across TCGA patient cohorts, LINC00514 RNA expression is significantly associated with the RNA expression of many other genes, with 16,399 significant associations in total. THYM shows the largest number of these associations.

The most reproducible LINC00514-associated genes across cancer lineages are CLDN9, ZNF789, and TEN1-CDK3. Each is linked with LINC00514 in more than 28 cancer types. Because this analysis shows association rather than direction, both LINC00514-to-partner and partner-to-LINC00514 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00514 versus CLDN9 in UCS, with a Pearson correlation of 0.51.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00514→partner) and Y-score (partner→LINC00514) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCS	CLDN9 →	+2.916	+0.781	<.001	<.001	2	29
ESCA	ZNF789 →	+0.720	+0.261	<.001	<.001	3	25
LGG	TEN1-CDK3 →	+0.641	+0.181	<.001	<.001	3	24
LGG	ZNF213-AS1 →	+0.756	+0.256	<.001	<.001	3	23
GBM	CHTF18 →	+1.145	+0.512	<.001	<.001	3	23
THYM	STPG3 →	+0.744	+1.721	<.001	<.001	3	23

Each partner links to its Q-omics profile. Showing the 6 strongest of 16,399 associations by consensus.

LINC00514 vs CLDN9 — UCS

Explore this scatter interactively →