LINC00491

Across TCGA patient cohorts, LINC00491 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,011 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LINC00491-associated proteins across cancer lineages are PGM1, SHANK3_S1503, and BOP1. Each is linked with LINC00491 in more than 2 cancer types. Because this analysis shows association rather than direction, both LINC00491-to-partner and partner-to-LINC00491 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00491 versus PGM1 in HNSC, with a Pearson correlation of -0.31.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00491→partner) and Y-score (partner→LINC00491) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	PGM1 →	-0.363	-1.034	.006	.006	3	3
HNSC	SHANK3_S1503 →	-0.485	-1.047	<.001	<.001	3	3
LSCC	BOP1 →	+0.355	+1.174	<.001	<.001	3	3
LSCC	ADGRE5 →	-0.250	-0.910	.001	<.001	3	3
LSCC	DSG2_S680 →	+0.812	+1.004	<.001	<.001	3	3
LSCC	ESRP1 →	+0.406	+0.826	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,011 associations by consensus.

LINC00491 vs PGM1 — HNSC

Explore this scatter interactively →