LINC00443

Across TCGA patient cohorts, LINC00443 RNA expression is significantly associated with the RNA expression of many other genes, with 6,401 significant associations in total. ESCA shows the largest number of these associations.

The most reproducible LINC00443-associated genes across cancer lineages are PLEKHG1, EFNB2, and CHST4. Each is linked with LINC00443 in more than 12 cancer types. Because this analysis shows association rather than direction, both LINC00443-to-partner and partner-to-LINC00443 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00443 versus PLEKHG1 in UCEC, with a Pearson correlation of 0.22.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00443→partner) and Y-score (partner→LINC00443) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	PLEKHG1 →	+0.824	+0.368	<.001	<.001	3	13
MESO	EFNB2 →	+1.319	+0.987	<.001	<.001	3	13
ESCA	CHST4 →	+1.397	+0.919	<.001	<.001	3	13
ESCA	SH3BGRL2 →	+1.856	+0.932	<.001	<.001	3	13
LUAD	TEK →	+0.822	+0.242	<.001	<.001	3	13
UCEC	MS4A8 →	+1.711	+0.204	<.001	<.001	3	12

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,401 associations by consensus.

LINC00443 vs PLEKHG1 — UCEC

Explore this scatter interactively →