LINC00402

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC00402 RNA expression is significantly associated with the protein abundance of many other proteins, with 19,861 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LINC00402-associated proteins across cancer lineages are WDFY4, SEPTIN1, and IL16. Each is linked with LINC00402 in more than 8 cancer types. Because this analysis shows association rather than direction, both LINC00402-to-partner and partner-to-LINC00402 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00402 versus WDFY4 in OV, with a Pearson correlation of 0.30.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00402→partner) and Y-score (partner→LINC00402) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVWDFY4 →+0.615+0.174<.001<.00139
LSCCSEPTIN1 →+0.922+0.726<.001<.00139
HNSCIL16 →+0.719+0.748<.001<.00139
HNSCWAS →+0.547+0.683<.001<.00138
LSCCZAP70 →+0.743+0.739<.001<.00138
OVADA2 →+0.614+0.149<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 19,861 associations by consensus.

LINC00402 vs WDFY4 — OV

Per-sample scatter of LINC00402 vs WDFY4 in OV (Pearson r = 0.30).

Explore this scatter interactively →

Exploration