LINC00398

Across TCGA patient cohorts, LINC00398 RNA expression is significantly associated with the RNA expression of many other genes, with 15,610 significant associations in total. THYM shows the largest number of these associations.

The most reproducible LINC00398-associated genes across cancer lineages are MR1, F8, and FBXO30-DT. Each is linked with LINC00398 in more than 26 cancer types. Because this analysis shows association rather than direction, both LINC00398-to-partner and partner-to-LINC00398 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00398 versus MR1 in PCPG, with a Pearson correlation of 0.31.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00398→partner) and Y-score (partner→LINC00398) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
PCPG	MR1 →	+0.938	+0.378	<.001	<.001	2	27
ESCA	F8 →	+0.714	+0.268	<.001	<.001	3	26
ACC	FBXO30-DT →	+0.726	+0.620	<.001	<.001	3	26
DLBC	PDE4DIPP2 →	+1.161	+0.405	<.001	<.001	3	25
SARC	CBX7 →	+0.898	+0.342	<.001	<.001	3	25
THYM	MEIS3P1 →	+1.820	+0.511	<.001	<.001	3	25

Each partner links to its Q-omics profile. Showing the 6 strongest of 15,610 associations by consensus.

LINC00398 vs MR1 — PCPG

Explore this scatter interactively →