LINC00358

Across TCGA patient cohorts, LINC00358 RNA expression is significantly associated with the RNA expression of many other genes, with 4,184 significant associations in total. COAD shows the largest number of these associations.

The most reproducible LINC00358-associated genes across cancer lineages are PCDH9-AS3, ZNF385D-AS2, and MRPS22P1. Each is linked with LINC00358 in more than 11 cancer types. Because this analysis shows association rather than direction, both LINC00358-to-partner and partner-to-LINC00358 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00358 versus PCDH9-AS3 in COAD, with a Pearson correlation of 0.95.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00358→partner) and Y-score (partner→LINC00358) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	PCDH9-AS3 →	+0.625	+0.326	<.001	<.001	3	12
LUAD	ZNF385D-AS2 →	+0.650	+0.018	<.001	<.001	3	12
LIHC	MRPS22P1 →	+0.617	+0.019	<.001	<.001	3	11
PRAD	LINC01712 →	+0.635	+0.007	<.001	<.001	3	11
PRAD	OR52E7P →	+0.760	+0.021	<.001	<.001	3	11
PRAD	OR14A2 →	+0.864	+0.006	<.001	<.001	3	11

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,184 associations by consensus.

LINC00358 vs PCDH9-AS3 — COAD

Explore this scatter interactively →