LINC00342

Across TCGA patient cohorts, LINC00342 RNA expression is significantly associated with the protein abundance of many other proteins, with 14,758 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC00342-associated proteins across cancer lineages are ILF2, NFIC, and NFIX. Each is linked with LINC00342 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC00342-to-partner and partner-to-LINC00342 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00342 versus ILF2 in GBM, with a Pearson correlation of 0.45.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00342→partner) and Y-score (partner→LINC00342) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	ILF2 →	+0.319	+0.548	<.001	<.001	3	5
HNSC	NFIC →	+0.296	+0.908	.006	.004	3	4
GBM	NFIX →	+0.460	+0.600	<.001	<.001	3	4
GBM	WDR5 →	+0.258	+0.326	<.001	<.001	3	4
HNSC	RBBP5 →	+0.269	+0.928	<.001	<.001	3	4
HNSC	TOP2B →	+0.406	+0.974	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 14,758 associations by consensus.

LINC00342 vs ILF2 — GBM

Explore this scatter interactively →