LINC00317

Across TCGA patient cohorts, LINC00317 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,889 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC00317-associated GO terms across cancer lineages are Sphingolipid metabolic process, Extrinsic apoptotic signaling pathway, and Negative regulation of cilium assembly. Each is linked with LINC00317 in more than 6 cancer types. Because this analysis shows association rather than direction, both LINC00317-to-partner and partner-to-LINC00317 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Sphingolipid metabolic process grouped by LINC00317-low versus LINC00317-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00317→partner) and Y-score (partner→LINC00317) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Sphingolipid metabolic process →	+0.112	+0.059	<.001	<.001	3	7
STAD	Extrinsic apoptotic signaling pathway →	+0.145	+0.068	<.001	<.001	3	6
STAD	Negative regulation of cilium assembly →	+0.106	+0.058	<.001	<.001	3	6
ESCA	Regulation of organelle assembly →	+0.141	+0.092	<.001	.004	3	6
STAD	Regulation of ligase activity →	+0.113	+0.063	<.001	<.001	3	6
ESCA	Neuron apoptotic process →	+0.120	+0.073	<.001	.003	2	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,889 associations by consensus.

Sphingolipid metabolic process by LINC00317 expression — STAD

Explore this box plot interactively →