LINC00305

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC00305 RNA expression is significantly associated with the protein abundance of many other proteins, with 3,013 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LINC00305-associated proteins across cancer lineages are VGLL4, ACP2, and CD8A_S231. Each is linked with LINC00305 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC00305-to-partner and partner-to-LINC00305 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00305 versus VGLL4 in LSCC, with a Pearson correlation of -0.26.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00305→partner) and Y-score (partner→LINC00305) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCVGLL4 →-0.256-0.028.007.00532
GBMACP2 →+0.182+0.077.001.00532
LSCCCD8A_S231 →+1.143+0.051<.001<.00132
CCRCCAGAP2_S752 →+0.824+0.339.002<.00132
LSCCDCDC2_S270 →+0.829+0.035<.001<.00132
GBMGGA2 →+0.182+0.085.005<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,013 associations by consensus.

LINC00305 vs VGLL4 — LSCC

Per-sample scatter of LINC00305 vs VGLL4 in LSCC (Pearson r = -0.26).

Explore this scatter interactively →

Exploration