LINC00298

Across TCGA patient cohorts, LINC00298 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,063 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC00298-associated GO terms across cancer lineages are Phospholipid biosynthetic process, Maintenance of cell number, and Protein localization to vacuole. Each is linked with LINC00298 in more than 24 cancer types. Because this analysis shows association rather than direction, both LINC00298-to-partner and partner-to-LINC00298 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Phospholipid biosynthetic process grouped by LINC00298-low versus LINC00298-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00298→partner) and Y-score (partner→LINC00298) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Phospholipid biosynthetic process →	+0.055	+0.059	<.001	<.001	3	25
ESCA	Maintenance of cell number →	+0.057	+0.054	<.001	<.001	2	25
STAD	Protein localization to vacuole →	+0.060	+0.061	<.001	<.001	3	24
STAD	Establishment of protein localization to vacuole →	+0.056	+0.065	<.001	<.001	3	24
STAD	Regulation of JNK cascade →	+0.051	+0.064	<.001	<.001	3	24
ESCA	Golgi to endosome transport →	+0.086	+0.101	<.001	<.001	3	24

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,063 associations by consensus.

Phospholipid biosynthetic process by LINC00298 expression — STAD

Explore this box plot interactively →