LINC00298

Across TCGA patient cohorts, LINC00298 mutation is significantly associated with the RNA expression of many other genes, with 15 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC00298-associated genes across cancer lineages are RN7SL134P, MIR548AI, and MIR6859-2. Each is linked with LINC00298 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC00298-to-partner and partner-to-LINC00298 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RN7SL134P grouped by LINC00298-low versus LINC00298-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00298→partner) and Y-score (partner→LINC00298) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	RN7SL134P →	+0.212	+3.599	<.001	.007	3	1
UCEC	MIR548AI →	+0.479	+5.736	<.001	.001	3	1
UCEC	MIR6859-2 →	+0.824	+4.105	<.001	.001	3	1
UCEC	RNU6-173P →	+0.669	+4.937	<.001	<.001	3	1
UCEC	RNY4P3 →	+0.402	+3.418	.009	.009	3	1
UCEC	MIR550A1 →	+0.547	+3.599	.001	.007	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 15 associations by consensus.

RN7SL134P by LINC00298 expression — UCEC

Explore this box plot interactively →